NET-GE:
NETwork-based Gene Enrichment
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NET-GE: Network-based Gene Enrichment analysis
A new version of NET-GE (NETGE-PLUS) is available at
http://net-ge2.biocomp.unibo.it
5811
gene sets analyzed till now
NET-GE is a network-based method for enrichment analysis of human gene sets.
Input: list of genes/proteins, one per line.
Example - UniProt_ACC: OMIM #143465 - ADHD
Example - Gene_Name: OMIM #143465 - ADHD
Example - ENSEMBL_ID: OMIM #143465 - ADHD
Identifier Format:
UNIPROT_ACC
ENSEMBL_ID
GENE_NAME
Identifiers (one per line):
(Mandatory)
Interaction network:
String
String0.9
Annotation database:
KEGG
Reactome
Gene Ontology - Biological Process
Gene Ontology - Molecular Function
Gene Ontology - Cellular Components
Multiple testing correction method:
Bonferroni
FDR
Significance threshold:
0.05
0.01
1e-02
1e-03
1e-04
1e-05
1e-06
1e-07
E-mail address:
(Optional)
To cite your use of the NET-GE, please reference:
Bovo S et al. (2016) NET-GE: a web-server for NETwork-based human gene enrichment.
Bioinformatics. 32(22):3489-3491
PMID:27485441
